# THIS IS A TEST INSTANCE ONLY! REPOSITORIES CAN BE DELETED AT ANY TIME!

### REVDEP: Recheck with 9 revep packages [ci skip]

feature/c
Henrik Bengtsson 3 months ago
parent
commit
2f9a8e67b9
5 changed files with 64 additions and 53 deletions
1. 24
R/aperm.R
2. 20
man/aperm.listenv.Rd
3. 23
4. 7
revdep/cran.md
5. 43
revdep/problems.md

#### 24 R/aperm.R View File

 @ -1,6 +1,11 @@ #' Transpose a 'listenv' array by permuting its dimensions #' #' @param a (listenv) The list environment to be transposed #' @usage #' \method{aperm}{listenv}(a, perm, ...) #' #' \method{t}{listenv}(x) #' #' @param a,x (listenv) The list environment to be transposed #' #' @param perm (integer vector) An index vector of length dim(a) #' @ -9,8 +14,21 @@ #' @return Returns a list environment with permuted dimensions #' #' @seealso #' This works [base::aperm()]. #' These functions works like [base::aperm()] and [base::t()]. #' #' @examples #' x <- as.listenv(1:6) #' dim(x) <- c(2, 3) #' dimnames(x) <- list(letters[1:2], LETTERS[1:3]) #' print(x) #' #' x <- t(x) #' print(x) #' #' x <- aperm(x, perm = 2:1) #' print(x) #' #' @aliases t.listenv #' @export aperm.listenv <- function(a, perm, ...) {  dim <- dim(a) @ -51,8 +69,6 @@ aperm.listenv <- function(a, perm, ...) {  a }       #' @rdname aperm #' @export t.listenv <- function(x) {

#### 20 man/aperm.listenv.Rd View File

 @ -2,12 +2,15 @@ % Please edit documentation in R/aperm.R \name{aperm.listenv} \alias{aperm.listenv} \alias{t.listenv} \title{Transpose a 'listenv' array by permuting its dimensions} \usage{ \method{aperm}{listenv}(a, perm, ...)   \method{t}{listenv}(x) } \arguments{ \item{a}{(listenv) The list environment to be transposed} \item{a, x}{(listenv) The list environment to be transposed}   \item{perm}{(integer vector) An index vector of length \code{dim(a)}}   @ -18,7 +21,20 @@ Returns a list environment with permuted dimensions } \description{ Transpose a 'listenv' array by permuting its dimensions } \examples{ x <- as.listenv(1:6) dim(x) <- c(2, 3) dimnames(x) <- list(letters[1:2], LETTERS[1:3]) print(x)   x <- t(x) print(x)   x <- aperm(x, perm = 2:1) print(x)   } \seealso{ This works \code{\link[base:aperm]{base::aperm()}}. These functions works like \code{\link[base:aperm]{base::aperm()}} and \code{\link[base:t]{base::t()}}. }

 @ -2,15 +2,15 @@   |field |value | |:--------|:----------------------------| |version |R version 4.0.2 (2020-06-22) | |os |Ubuntu 18.04.4 LTS | |version |R version 4.0.3 (2020-10-10) | |os |Ubuntu 18.04.5 LTS | |system |x86_64, linux-gnu | |ui |X11 | |language |en | |collate |en_US.UTF-8 | |ctype |en_US.UTF-8 | |tz |America/Los_Angeles | |date |2020-08-16 | |date |2021-02-14 |   # Dependencies   @ -20,20 +20,17 @@   # Revdeps   ## All (12) ## All (9)   |package |version |error |warning |note | |:-----------------------------------------------|:-------|:-----|:-------|:----| |[aroma.affymetrix](problems.md#aromaaffymetrix) |3.2.0 | | |1 | |[aroma.core](problems.md#aromacore) |3.2.1 | | |1 | |furrr |0.1.0 | | | | |future |1.18.0 | | | | |future.apply |1.6.0 | | | | |future.BatchJobs |0.16.2 | | | | |future.batchtools |0.9.0 | | | | |future.callr |0.5.0 | | | | |ItemResponseTrees |0.2.5 | | | | |[aroma.core](problems.md#aromacore) |3.2.2 | | |1 | |furrr |0.2.2 | | | | |future |1.21.0 | | | | |future.apply |1.7.0 | | | | |future.batchtools |0.10.0 | | | | |future.callr |0.6.0 | | | | |[origami](problems.md#origami) |1.0.3 | | |1 | |[PCRedux](problems.md#pcredux) |1.0-6 | | |1 | |PSCBS |0.65.0 | | | |  

#### 7 revdep/cran.md View File

 @ -0,0 +1,7 @@ ## revdepcheck results   We checked 9 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.    * We saw 0 new problems  * We failed to check 0 packages  

#### 43 revdep/problems.md View File

 @ -3,11 +3,10 @@ 
  * Version: 3.2.0 * GitHub: https://github.com/HenrikBengtsson/aroma.affymetrix * Source code: https://github.com/cran/aroma.affymetrix * URL: https://www.aroma-project.org/, https://github.com/HenrikBengtsson/aroma.affymetrix * BugReports: https://github.com/HenrikBengtsson/aroma.affymetrix/issues * Date/Publication: 2019-06-23 06:00:14 UTC * Number of recursive dependencies: 70 * Number of recursive dependencies: 74   Run revdep_details(, "aroma.affymetrix") for more info   @ -28,12 +27,11 @@ Run revdep_details(, "aroma.affymetrix") for more info   
  * Version: 3.2.1 * Version: 3.2.2 * GitHub: https://github.com/HenrikBengtsson/aroma.core * Source code: https://github.com/cran/aroma.core * URL: https://github.com/HenrikBengtsson/aroma.core, https://www.aroma-project.org/ * BugReports: https://github.com/HenrikBengtsson/aroma.core/issues * Date/Publication: 2020-02-04 15:20:21 UTC * Number of recursive dependencies: 46 * Date/Publication: 2021-01-05 05:10:12 UTC * Number of recursive dependencies: 47   Run revdep_details(, "aroma.core") for more info   @ -44,7 +42,7 @@ Run revdep_details(, "aroma.core") for more info * checking package dependencies ... NOTE    Packages suggested but not available for checking:  'sfit', 'expectile', 'HaarSeg', 'mpcbs'  'expectile', 'HaarSeg', 'mpcbs'     # origami @ -52,11 +50,10 @@ Run revdep_details(, "aroma.core") for more info 
  * Version: 1.0.3 * GitHub: https://github.com/tlverse/origami * Source code: https://github.com/cran/origami * URL: https://tlverse.org/origami * BugReports: https://github.com/tlverse/origami/issues * Date/Publication: 2020-01-16 22:40:02 UTC * Number of recursive dependencies: 82 * Number of recursive dependencies: 86   Run revdep_details(, "origami") for more info   @ -69,25 +66,3 @@ Run revdep_details(, "origami") for more info  Package unavailable to check Rd xrefs: ‘glmnet’     # PCRedux   
   * Version: 1.0-6 * Source code: https://github.com/cran/PCRedux * URL: https://CRAN.R-project.org/package=PCRedux * BugReports: https://github.com/PCRuniversum/PCRedux/issues * Date/Publication: 2020-03-06 08:10:02 UTC * Number of recursive dependencies: 117   Run revdep_details(, "PCRedux") for more info   
   ## In both   * checking package dependencies ... NOTE    Package suggested but not available for checking: ‘FFTrees’    `